BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F06SP1|AL429253
(922 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig956 1814 0.0
>3x_Contig956
Length = 4347
Score = 1814 bits (913), Expect = 0.0
Identities = 918/922 (99%)
Strand = Plus / Minus
Query: 1 tagcgctaccatcatctgaacccgccatgaaggattctccattgttgawaaatttgatgg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1593 tagcgctaccatcatctgaacccgccatgaaggattctccattgttgaaaaatttgatgg 1534
Query: 61 cactaacatcactatcactgatgaaaaaactttgggctgaattcggctgtctaacatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1533 cactaacatcactatcactgatgaaaaaactttgggctgaattcggctgtctaacatccc 1474
Query: 121 atagatacgcatacccgtccgatcctccggtgatgaaattatgaccatatcgaccagtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1473 atagatacgcatacccgtccgatcctccggtgatgaaattatgaccatatcgaccagtgt 1414
Query: 181 ttgctggtggtaaatccatggtcaagacatcgcctaagtgatctataaattccgtaactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1413 ttgctggtggtaaatccatggtcaagacatcgcctaagtgatctataaattccgtaactc 1354
Query: 241 ttttacttttaggaatatcccacatagcgcatgtcatatcaccacttgcagtcaaaatag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1353 ttttacttttaggaatatcccacatagcgcatgtcatatcaccacttgcagtcaaaatag 1294
Query: 301 tcctctcatcaagaaactccgtagctgaaatgtagcaggtatggcccttgaagatggaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1293 tcctctcatcaagaaactccgtagctgaaatgtagcaggtatggcccttgaagatggaaa 1234
Query: 361 tcacattctgttgtattctattatctcttgaaacacgatacactgaacaatgattgtcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 tcacattctgttgtattctattatctcttgaaacacgatacactgaacaatgattgtcca 1174
Query: 421 aacccgcacttgcaaccagatttccgctgggactgatagcgctactcaagacccattggg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 aacccgcacttgcaaccagatttccgctgggactgatagcgctactcaagacccattggg 1114
Query: 481 ataacaaggggatagcgctttttttaagcccagtgaagggatcccatatgattatnaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1113 ataacaaggggatagcgctttttttaagcccagtgaagggatcccatatgattataaacc 1054
Query: 541 cgtcttggctcgagctgagtacgcttgccgaatcctggctccattttacgtctgagattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 cgtcttggctcgagctgagtacgcttgccgaatcctggctccattttacgtctgagattt 994
Query: 601 tattattatgtcctttcaaagttcgaaccggttgtwagtttaactcgtgtaatgaattga 660
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 993 tattattatgtcctttcaaagttcgaaccggttgtaagtttaactcgtgtaatgaattga 934
Query: 661 cgccgtgagacaagttcatcaattgagtgtcttgaattttgcctttaattctgttgattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 933 cgccgtgagacaagttcatcaattgagtgtcttgaattttgcctttaattctgttgattt 874
Query: 721 ggtcgtataactgcttgcactccgtctttgctgtccttattttgtcctccactgtaccag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 873 ggtcgtataactgcttgcactccgtctttgctgtccttattttgtcctccactgtaccag 814
Query: 781 ctgaattcatattgggataatggtaatcgtgcacaatcagttcctgtggacgaattgcat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 ctgaattcatattgggataatggtaatcgtgcacaatcagttcctgtggacgaattgcat 754
Query: 841 attctgctgaatcgacttccatcttggatgctgtttgcaactagacactgtwataaggaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 753 attctgctgaatcgacttccatcttggatgctgtttgcaactagacactgtaataaggaa 694
Query: 901 aggaagggggttgaaatgaaat 922
||||||||||||||||||||||
Sbjct: 693 aggaagggggttgaaatgaaat 672
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5540
Number of Sequences: 1807
Number of extensions: 5540
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 922
length of database: 10,358,551
effective HSP length: 16
effective length of query: 906
effective length of database: 10,329,639
effective search space: 9358652934
effective search space used: 9358652934
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)